BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H10LP1|AL425298
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1449 1642 0.0
>3x_Contig1449
Length = 7865
Score = 1642 bits (823), Expect = 0.0
Identities = 852/863 (98%), Gaps = 3/863 (0%)
Strand = Plus / Plus
Query: 1 gatctttcctttggtaacctcgtcctcctaatcctccacctagacgtcgaggtttgaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4834 gatctttcctttggtaacctcgtcctcctaatcctccacctagacgtcgaggtttgaaga 4893
Query: 61 atttcaccgttctgcctctttctatatcaacgatggatgttcggcccatgatttctattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 atttcaccgttctgcctctttctatatcaacgatggatgttcggcccatgatttctattc 4953
Query: 121 ccttccttacaccaagctctctgaaacactgtktggagtcttcataactggtaaactgca 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4954 ccttccttacaccaagctctctgaaacactgtttggagtcttcataactggtaaactgca 5013
Query: 181 caaaaccgtatcctcggctcttaccgtcttggtctcttactattctgcacgattcaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5014 caaaaccgtatcctcggctcttaccgtcttggtctcttactattctgcacgattcaatgt 5073
Query: 241 cgccgtatttgacgaaactcttctgtagttcaacttcgtctacggcatagtgtaaccgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5074 cgccgtatttgacgaaactcttctgtagttcaacttcgtctacggcatagtgtaaccgtc 5133
Query: 301 cgacaaataatgtgcggtaggggtcactagaaatgkttgcatctgattcagggtgccact 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5134 cgacaaataatgtgcggtaggggtcactagaaatgtttgcatctgattcagggtgccact 5193
Query: 361 cttgtattttcttcatcaactcctcctgtkctttgtgcgattcgttcatggcttcatcat 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5194 cttgtattttcttcatcaactcctcctgttctttgtgcgattcgttcatggcttcatcat 5253
Query: 421 atactttcaagtgktggttctctgatacgggatgggttgccttcttatactctgaaacat 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5254 atactttcaagtgttggttctctgatacgggatgggttgccttcttatactctgaaacat 5313
Query: 481 gttgcaacacggctgakacaccagtgagtgcatatttcttgttctggtttcgccttactc 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5314 gttgcaacacggctgatacaccagtgagtgcatatttcttgttctggtttcgccttactc 5373
Query: 541 tcactctcgatggtggtaatggtggaccttgtgtaaataactttgatactgaagacggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5374 tcactctcgatggtggtaatggtggaccttgtgtaaataactttgatactgaagacggaa 5433
Query: 601 gtttggtcaaagtgtgaaagccattatgcctgttgtatttcctcgtttgtggtttcatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5434 gtttggtcaaagtgtgaaagccattatgcctgttgtatttcctcgtttgtggtttcatct 5493
Query: 661 attaattggaatggatatgtgccaatattatctttattgatgcgcttaccgcagtatcga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5494 attaattggaatggatatgtgccaatattatctttattgatgcgcttaccgcagtatcga 5553
Query: 721 ggttaaggtgtatgcgctgaggtaaagtgtatgtwattatattccatatttttggcgcat 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5554 ggttaaggtgtatgcgctgaggtaaagtgtatgtaattatattccatatttttggcgcat 5613
Query: 781 ctttactatttagatgttaaatgttacaattttma-ataattgatggaaaaacc-twaaa 838
||||||||||||||||||||||||||||||||| | |||||||||||||||||| | |||
Sbjct: 5614 ctttactatttagatgttaaatgttacaattttcacataattgatggaaaaaccttaaaa 5673
Query: 839 agagtgtgt-aaaatatgtattt 860
||||||||| |||||||||||||
Sbjct: 5674 agagtgtgtcaaaatatgtattt 5696
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5754
Number of Sequences: 1807
Number of extensions: 5754
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)